curious, why do you run that operating system and not one of the known problem free ones like 6006?
It won't be the tcm speed disable. Does it work right driving normal?
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I was not aware that 9044 has had issues?
I know when Randy took his truck to the track(lbz) it would blow past the shift points as the converter wasn't locking. On the street it locked and shifted perfect. His was twinned with 40 overs and a suncoast converter. Take it to the track with the current tune that seems to be working and launch it hard, make sure it sticks, and see what happnes.